Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLEN-GYRVYNTEHLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHYTKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF
1JBG Chain:A ((2-98))
--KYQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQS-QKEILMKKKQRMDEMI---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44869 for 583 contacts (-77.0/contact) +
2D Compatibility (PS) -10387 + (NN) -7030 + (LL) 4144
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -66892.0 ( -114.74 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1JBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JBG-query.scw
PDB file :
Tito_Scwrl_1JBG.pdb
: