Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKAIRTLVYA-VGSKNDKKIRLEIIE-------------------------------------------------------------------
2PT7 Chain:G ((115-259))
KLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPTYGYSIRLEISTFLQNQEKVMDTQLQSVIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVIN
General information:
TITO was launched using:
RESULT:
Template:
2PT7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28071 for 486 contacts (-57.8/contact) +
2D Compatibility (PS) -8090 + (NN) -2524 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -42635.0 ( -87.73 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2PT7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PT7-query.scw
PDB file :
Tito_Scwrl_2PT7.pdb
: