Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG-------------DVTVDITSIDSIKKMYEQ----VGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKL-----ESFFQGFVPVPAAKVARAFEKSVFGA-QTGESYKVY |
| 3GED Chain:A ((3-226)) | RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVT---EFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77451 for 1600 contacts (-48.4/contact) +
2D Compatibility (PS) -20941 + (NN) -5471 + (LL) 144
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -113269.0 ( -70.79 by residue)
QMean score : 0.478
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