Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVLQTEMKVIQQTEIADKVYELILTGECVAGMS-PGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRV--EGDGTRDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEKGVQVMFVNGFQSAKDSFYAQEMAEYG--TVHIATVDGSLGTQGFVTDITKNFPEEPDVIYSCGPKAMLQAVKASFPE-TKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL
1EP1 Chain:B ((3-261))-LQEMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSKLESGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASENVKILENEFSNLKNVTLKIATDDGSYGTKGHVGMLMNEIDFEVDALYTCGAPAMLKAVAKKYDQLERLYISMESRMACGIGACYACVEHDKEDESHALKVCEDGPVFLGKQLSL


General information:
TITO was launched using:
RESULT:

Template: 1EP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156836 for 2091 contacts (-75.0/contact) +
2D Compatibility (PS) -27479 + (NN) -10147 + (LL) 192
1D Compatibility (HY) -30000 + (ID) 5900
Total energy: -230170.0 ( -110.08 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_1EP1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EP1-query.scw
PDB file : Tito_Scwrl_1EP1.pdb: