Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQSETKALEALQNGSDIRGIAIATEKYQITLTDERVEKIAYGFAKWLKEEKKVEGQAKVAIGHDSRLSAERLKAALVKGLTFAGIDVVDVGLATTPAMFMATQYEDYDCDAGIMITASHLPFMYNGLKLFTKSGGAEHEDIDYIVAHADKSFIENGLNLGKVTKQDLLSTYAADLTDKIRAGITDAADKMKPLQGSHIIVDAGNGAGGFFAEKVLAELGADISESQFLDPDGNFPNHIPNPDNEEAMASLKKAVLASGADLGVIFDTDVDRAAIMDKNGESLNRNPLIAVISSIILEEKPGTTIVTDSTTSGHLQAFIEAKGGKQHRFKRGYRNVINEALRLNANGTPSEIAIEVSGHAALKENYF-LDDGAYLIAKILMTYATLRKNGQDLPDLIADLKEPAESEEIRLSITANDFKAYGKEALADFLTFVEADPDMELEPVNQEGIRVNTKGALGEGWFLLRMSLHEPVMPMNLESDEAGGIRKVKDRLAGFFAT---KADLKM |
1K2Y Chain:X ((5-463)) | ---KAPTLPASIFRAYDIRGV------VGDTLTAETAYWIGRAIGSESLAR----GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANV--LEGKSGVMLTGAHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGV--GSVEQVDILPRYFKQIRDDIAMA-----------KPMKVVVDCGNGVAGVIAPQLIEALGCSVIPL-YCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERWFGFDDGIYSAARLLEILS---QDQRDSEHVFSAFPSDISTPEINITVTEDS-----KFAIIEALQRDAQWGEGNITTLD--GVRVDYP----KGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSSLPVPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173863 for 4156 contacts (-41.8/contact) +
2D Compatibility (PS) -48817 + (NN) -22047 + (LL) 2996
1D Compatibility (HY) -28800 + (ID) 6400
Total energy: -276931.0 ( -66.63 by residue)
QMean score : 0.544
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