Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDSKVAIEAIH----KRHAKNPL---FKP--HLD---AILEMADSLELFFAEWRNVSQ---NKQADQLARQAIKKQKQPGVK
3H08 Chain:B ((5-145))
ITIYTDGAASGNPGKGGWGALLMYGSSRKEISGYDPATTNNRMELMAAIKGL-EALKEPAR-VQLYSDSAYLVNAMNEGWLKRWVKNGWKTAKKPVENIDLWQEILKLTTLHRVTFHKVKG-SDNPYNSRADELARLAIKEN------
General information:
TITO was launched using:
RESULT:
Template:
3H08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69008 for 957 contacts (-72.1/contact) +
2D Compatibility (PS) -13661 + (NN) -7748 + (LL) 600
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -97367.0 ( -101.74 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3H08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H08-query.scw
PDB file :
Tito_Scwrl_3H08.pdb
: