Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
1ORN Chain:A ((5-216))
-LTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMR------
General information:
TITO was launched using:
RESULT:
Template:
1ORN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143581 for 1687 contacts (-85.1/contact) +
2D Compatibility (PS) -22427 + (NN) -12792 + (LL) 180
1D Compatibility (HY) -27200 + (ID) 7550
Total energy: -213370.0 ( -126.48 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1ORN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORN-query.scw
PDB file :
Tito_Scwrl_1ORN.pdb
: