Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEATGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYEIPLATNIGTAEILIRGLGAGFLDWRDLRRNDE
2XW6 Chain:A ((4-125))
RALALIAHDAKKEEMVAFCQRHREVLARFPLVATGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMAAEALIPWLQSL------------
General information:
TITO was launched using:
RESULT:
Template:
2XW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94352 for 1006 contacts (-93.8/contact) +
2D Compatibility (PS) -13063 + (NN) -4455 + (LL) 736
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -124784.0 ( -124.04 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2XW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XW6-query.scw
PDB file :
Tito_Scwrl_2XW6.pdb
: