Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREINHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKDRDKDRWTKKEEKAK
2GTA Chain:A ((2-98))
SDKTMKDIQAEVDRYIGQFKEGYFSPLAMMARLTEELGELAREVNHRYGEKPKKATEDDKSMEEEIGDVLFVLVCLANSLDISLEEAHDRVMHKFNT--------------
General information:
TITO was launched using:
RESULT:
Template:
2GTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11071 for 539 contacts (-20.5/contact) +
2D Compatibility (PS) -10586 + (NN) -8320 + (LL) 928
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -43549.0 ( -80.80 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2GTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GTA-query.scw
PDB file :
Tito_Scwrl_2GTA.pdb
: