Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------MPNI-LDSLWNSMA----------LFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLN-------ILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYL----HQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIY---DLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSV--ITISAGIANYDGRNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
| 1W25 Chain:A ((1-454)) | SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAID-LPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEG-DTPEALLKRADEGVYQAKASGRNAVVGKAAH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -367613 for 2951 contacts (-124.6/contact) +
2D Compatibility (PS) -39764 + (NN) -11958 + (LL) 400
1D Compatibility (HY) -6800 + (ID) 3550
Total energy: -429285.0 ( -145.47 by residue)
QMean score : 0.316
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