Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------LFELVNSYIDSLALFLAILFIQGMSFRKIRQYR---PNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIY-----------TNMRILILMVTSVFGGRIPLIF---AYLVMLFGRISFDIASPTTSRYVIL---MTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNRTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPY--NPASGKVTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
| 1W25 Chain:A ((1-454)) | SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNL--DHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASN-VRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343843 for 2898 contacts (-118.6/contact) +
2D Compatibility (PS) -40172 + (NN) -16522 + (LL) 728
1D Compatibility (HY) -7600 + (ID) 3800
Total energy: -411209.0 ( -141.89 by residue)
QMean score : 0.319
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