Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYKTKQSLDQLVQNGSTPGISYQIKT-NHLEENNIMGLKSVFPEAEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQVYLPDFQY---NNVTILHLLTHSSGLAQNIPNFS-------------MNNREDVMRYVYA--TPQINTPGTVVTYADANFLLLGYLISKLDG-NYEKAIQNNILEPLIMTNTSFHPVN---KKQVIPTELDQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQLGAPILSEKTWQLMQINHTP-G----LNRSRGLGWDLRGE----SVLYHTGF---TGTFMVLDLKRQASLIVLSNRVHPSRANPNFVDKRDSIVDTFIEEVSNTKEV |
| 2QMI Chain:A ((3-331)) | -VGKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVE-ARLPS--TPETIYGIGSITKSF-TALAIMKLVEEGGLSLDDPVEKFVNIKLRPFGEPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMG-YILDK---EGRLVPQP--FPYGITADGGLLSSVLDLAKYLKMYIERD-ESIVSKEYIEKMETSYIKVPWEIFGGEGYGYGLIIYPNFLGEKLVGHSGSVGMYTGYIGYIPEKKIGVAVLENSSG----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125625 for 2474 contacts (-50.8/contact) +
2D Compatibility (PS) -31060 + (NN) -8486 + (LL) 2108
1D Compatibility (HY) -16400 + (ID) 3650
Total energy: -183113.0 ( -74.01 by residue)
QMean score : 0.463
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