Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNPFAAVK--LADEEKEMADALIYQSVHQFSREKVLQQIDEALDTRDEAAFHKLVRILQQMDTEKE
3DO9 Chain:A ((4-181))
---PVSVNEKKDFVKWFLNNYQLKQRECVWILNYLMSHDQLMHKVHFVEHAKYCPRGLVMSANCVKDTPFHFFKQNVMTTDAEKSFHDIRLNRDEDIYIQLNFKSSFQNANYVAVLEENPYLPKHIEVNEKDRLLAERFLEESVFSFRRERLLKQIDEALDKQDKEAFHRLTAELKMLEGH--
General information:
TITO was launched using:
RESULT:
Template:
3DO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64851 for 1201 contacts (-54.0/contact) +
2D Compatibility (PS) -19020 + (NN) -9176 + (LL) 584
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -114513.0 ( -95.35 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3DO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DO9-query.scw
PDB file :
Tito_Scwrl_3DO9.pdb
: