Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRFEPGEV--QQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
1Q3T Chain:A ((15-236))
--KTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEKRM--
General information:
TITO was launched using:
RESULT:
Template:
1Q3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119303 for 1696 contacts (-70.3/contact) +
2D Compatibility (PS) -24124 + (NN) -13998 + (LL) 100
1D Compatibility (HY) -18000 + (ID) 6600
Total energy: -181925.0 ( -107.27 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1Q3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q3T-query.scw
PDB file :
Tito_Scwrl_1Q3T.pdb
: