Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEAS-QQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
3K5B Chain:B ((21-120)) | ---------------------------------------------------------------------------------------------------GLIKSLAEKEKQLLERLEAAKKEAEERVKRAEAEAKALLEEAEAKAKALEAQYRERERAETEALLARYRERAEAEAKAVREKAMARLDEAVALVLKEVLP----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32643 for 393 contacts (83.1/contact) +
2D Compatibility (PS) -12240 + (NN) -16876 + (LL) 8700
1D Compatibility (HY) 0 + (ID) 1100
Total energy: 11127.0 ( 28.31 by residue)
QMean score : 1.035
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