Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTASISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLKTGERYLAATSFLTFVALGADGKTVEVPLVEPETEEQKRIHAGAEARSIARKIRLKENQSLAESLSTDIPW
1Y7U Chain:A ((13-173))
------KTANESRVFKTSRVFPTDLNDHNTLFGGKILSEMDMVASISASRHSRKECVTASMDWVDFLHPVRSSDCVSYESFVIWTGRTSMEVFVKVVSEYLISGEKRIAATSFVTFVALSKENNPVPVPRVIPDTEEEKESHRIAVLRAEQRHIRKAESKKVATLLT-----
General information:
TITO was launched using:
RESULT:
Template:
1Y7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65941 for 1211 contacts (-54.5/contact) +
2D Compatibility (PS) -17659 + (NN) -3784 + (LL) 844
1D Compatibility (HY) -11200 + (ID) 4300
Total energy: -102040.0 ( -84.26 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7U-query.scw
PDB file :
Tito_Scwrl_1Y7U.pdb
: