Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGKGEEIS
3W6J Chain:A ((6-169))
--PYNVKIEAFEGPLDLLLHLINRYEIDIYDIPVAQITEQYMAYIHAMQELELDIASEYLVMAATLLAIKSKMLLPP--------------DPREELTQRLLEYKKFKEAARELKRREEERALLFTKPPSDLSAYA-------LDVNVYDMLGALSKLLRRKKL-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58793 for 777 contacts (-75.7/contact) +
2D Compatibility (PS) -15516 + (NN) -14342 + (LL) 10096
1D Compatibility (HY) -21200 + (ID) 4800
Total energy: -104555.0 ( -134.56 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_3W6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W6J-query.scw
PDB file :
Tito_Scwrl_3W6J.pdb
: