Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKTLFDKLWNRHVIYGKE----GEPQLLYVDLHLIHEVTSPQAFEGLRLEN-RPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCAEFGVTLADMGSDRQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQKPKSMGIEINGKLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTICNMAIEGGAKMGMMAPDETTFEYVRGREYAPTDMDKAISD--WKTLQTDSDAEYDLHIKMDASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEQIELGYVFIGSCTNARLSDLEEAARIV-KGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEWREPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGK-GARTHLVSPAMAAAAAINGHFIDIRKVAVISGGN |
| 4NQY Chain:B ((22-441)) | --MTIVEKILAKA--SGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLKEYGIEKVWNPEKIVILFD------------NHILMRKFVKEQGIKYFYDI--------REGVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDLQPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIEPDEKTIQYVK------EAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVD---------------NVKQAREVAG-KP--------IDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALKEGIIEKFLKYGCVVTNPSCSACMGSLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDPR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173742 for 3648 contacts (-47.6/contact) +
2D Compatibility (PS) -43472 + (NN) -16245 + (LL) 3556
1D Compatibility (HY) -26400 + (ID) 7550
Total energy: -263853.0 ( -72.33 by residue)
QMean score : 0.424
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