Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRGPQAEKVTKL
3PF5 Chain:A ((1-65))
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANVTK-
General information:
TITO was launched using:
RESULT:
Template:
3PF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23109 for 436 contacts (-53.0/contact) +
2D Compatibility (PS) -6663 + (NN) 157 + (LL) 176
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -40139.0 ( -92.06 by residue)
QMean score : 0.792
(partial model without unconserved sides chains):
PDB file :
Tito_3PF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PF5-query.scw
PDB file :
Tito_Scwrl_3PF5.pdb
: