Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYFDHAATTKMSEAALEVFMSASREFFANSESLHDAGTKSAALLEKCRGSFAEILHVPSRGIMFTSGGTESNQIAIQTLLHS-TK-KKEVLVSPLEHASVWQQLEALEEAGACWLRLLPVDAFGRVDPAVLSDMISPDTGLVIIQHVNSEIGSIQPIRELAHIAKQA--GVYFHTDIVQSFGKLDLTL--DDVTSFSISSHKIYGPKGAGLLFIKPDVPMQVPLPNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAK-VKVEGG-LNTSPFILGITLPNMQGQEALLALNEADIQISTTSACSLRDPAPSRTLLATGKTIEEASRFIRLSFGRENELSDSLIFKKELDKLLRKR |
1EG5 Chain:A ((2-375)) | RVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFK-VKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST------------HVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192441 for 3122 contacts (-61.6/contact) +
2D Compatibility (PS) -39209 + (NN) -26256 + (LL) 488
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -282018.0 ( -90.33 by residue)
QMean score : 0.586
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