Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFTGNPRASEVVGVDSEGALEAYGLVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNRDFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK-- |
| 1F0K Chain:A ((7-357)) | KRLMVMAGGTGGHVFPGLAVAHHLMAQGW--QVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPG-----AFPNAEVVGNPVRTDVL--ALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDS-VTIWHQSGKGSQQSVEQAYAEAG-QPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQH-KDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVSRVARAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196959 for 3163 contacts (-62.3/contact) +
2D Compatibility (PS) -38549 + (NN) -19290 + (LL) 848
1D Compatibility (HY) -20000 + (ID) 5450
Total energy: -279400.0 ( -88.33 by residue)
QMean score : 0.639
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