Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMPLVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFIIIAFAIFIFVKVLTSFIKKKEQTVEETPVPPTEEYLKEIRDLLKEQQK
3HZQ Chain:A ((1-94))
---MLKEFKEFALKGNVLDLAIAVVMGAAFNKIICSLVENIIMPLIGKIFGSVDFAKEW---SFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKE----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58784 for 453 contacts (-129.8/contact) +
2D Compatibility (PS) -9439 + (NN) -223 + (LL) 2972
1D Compatibility (HY) -16000 + (ID) 2950
Total energy: -84424.0 ( -186.37 by residue)
QMean score : 0.160
(partial model without unconserved sides chains):
PDB file :
Tito_3HZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZQ-query.scw
PDB file :
Tito_Scwrl_3HZQ.pdb
: