Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS
3B49 Chain:A ((8-211))
----KIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLDGYSDFVVPPLEGFWWSEGKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVARKKKPDVDTSRVKLVRFEEGECVQMMHVGPFSEEVHTVAEMHQFMETEGLRNDTGAIRKHHEIYLSDPRKANPEKMKTILRLPVS
General information:
TITO was launched using:
RESULT:
Template:
3B49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61258 for 1507 contacts (-40.6/contact) +
2D Compatibility (PS) -22118 + (NN) -12224 + (LL) 428
1D Compatibility (HY) -27600 + (ID) 9700
Total energy: -132472.0 ( -87.90 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3B49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B49-query.scw
PDB file :
Tito_Scwrl_3B49.pdb
: