Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSE-FG-D--------KNEKLLHKVENLNPDVIAITGDLFDRQGDS----V-PKELIKKL----------------TKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKMGVV-NLED---------KTATIDVGGQKFQMSGLRSSANLDYDYSYYKKGLAEIQTQQD-SQYYQVLLSHMPDYFK--------LYVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK |
| 3T1I Chain:A ((31-274)) | -----------------------------------------NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQLNISIPVFSIHGNHDDPTGADA-LCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEHECKIAPT------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39356 for 1271 contacts (-31.0/contact) +
2D Compatibility (PS) -18826 + (NN) -6777 + (LL) 8184
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -66925.0 ( -52.66 by residue)
QMean score : 0.384
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