Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAIDFAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGS---------------------GCGAENIRESVRLGINKINVGSDFMKAQVNQIKTNLKES-PAVNYVDLIHETIKAGTKAVKYYIHLSGSTGKSL |
1RVG Chain:A ((1-305)) | MLVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMK-YGG-RALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEE----KDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156647 for 2506 contacts (-62.5/contact) +
2D Compatibility (PS) -30639 + (NN) -12113 + (LL) 108
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -219841.0 ( -87.73 by residue)
QMean score : 0.553
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