Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQE-IALPQKWASYQEVCDNIALSVKNLEHVLIEA
1JL3 Chain:A ((3-139))
--NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPH--VKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK--
General information:
TITO was launched using:
RESULT:
Template:
1JL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65684 for 1069 contacts (-61.4/contact) +
2D Compatibility (PS) -14803 + (NN) -9448 + (LL) 832
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -97203.0 ( -90.93 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1JL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JL3-query.scw
PDB file :
Tito_Scwrl_1JL3.pdb
: