Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
2G0W Chain:A ((22-296))
---------KCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
General information:
TITO was launched using:
RESULT:
Template:
2G0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159873 for 2454 contacts (-65.1/contact) +
2D Compatibility (PS) -30191 + (NN) -17856 + (LL) 232
1D Compatibility (HY) -37200 + (ID) 13750
Total energy: -258638.0 ( -105.39 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_2G0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0W-query.scw
PDB file :
Tito_Scwrl_2G0W.pdb
: