Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
2OQQ Chain:A ((8-37))
LENRVKDLENKNSELEERLSTLQNENQMLR---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1282 for 111 contacts (11.5/contact) +
2D Compatibility (PS) -3386 + (NN) -2860 + (LL) 2984
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -4080.0 ( -36.76 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_2OQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQQ-query.scw
PDB file :
Tito_Scwrl_2OQQ.pdb
: