Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYEMISDYKDNKMYRDSFNRLAESTFDINFEE----WYRDGFWNDKYICYSYI-DDNKVIANVSINKMNLIYQGE-DYRALQIGTVMTHPDYRGQGLAKKLLEHVIAKYED-QYDFLYLFANDTVLDFYPKFGFERVEES-SFTVDACSL--K--R-----ESSNLKKLNPGNKTDFQLISRIVSEKTPLSNILDVRESEDLLMFYVLIA-----LKNELYYIEELDVIVLMEQED---ADLYVLDILSTKKLDVVEVLRYLPI-KKIETIHLLFTPEKS-KYIDA---AHI-IETEDMLFVRPNILTNENYFLFPATSHA |
| 3R1K Chain:A ((35-329)) | -----------TEDDWPGMFLLAAASFTDFIGPESATAWRTLV--PTDGAVVVRD-GSEVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEG--GIYGRFGYGPATTLHELTVDRRFARFHADAPGGGLGGSSVRLVRP--TEHRGEFEAIYERWRQ-QVPGGLLRPQVLWDELLAECKAAPGGDRESFALLHPDGYALYRVDRTDLKLARVSELRAVTADAHCALWRALIGLDSMERISIITHPQDPLPHLLTDTRLARTTWRQDGLWLRIMNVPA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156459 for 1885 contacts (-83.0/contact) +
2D Compatibility (PS) -27475 + (NN) -5032 + (LL) 1776
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -194340.0 ( -103.10 by residue)
QMean score : 0.513
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