Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDGSVVIEISLDDKKADKQLDAFEKDLAKAGTNAGAALDKAYREAVSDIASQSKRLKDTFVNAFKSMGNAGSNALKASLNFIRELPSNVQAALSKLASTVKTGFVNAAKASITAVKNLGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKISINVIKSIPGAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPGAAKTAATAVKNSFVVAYKAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSALKTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGMREALKNSVEKPAEQARFSILRLAAAFGLIAATKNVVGSAIGRVDTIDTATKSLTVLTGSAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVGNGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSEGSLESTRAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLANIVENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLAKVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVANTIKGSFVKLVGTLGSTTAAFGVVVAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVSALKPVGSGFKGILKYIGVRAWVVLGFALAAVVDVIQVLARIVLVAIKALQGLYYAIKAAFQVLQGDLKGAKKSLEQSKDAFVDAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKTAKKTETSGK-----KIKDT-LKLVESTAKQTETTVSKSNQAIDTMLSGG-------VDQYG----NKLSEKTKSFLNSAKELYSQYQESAKKSQDAYTAAMEKAQSLEGDKRKKAIADANKTLVDETTKNNSTLLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLEQGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQIDEQTKKNQTLSTNLKNWASEMNSIIANGGTLNAQTFANGLSQLGNISDEQLSALWQNFVSTSTSIDNTLAGLAGIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVLSTISSLPNGMFLNGESGKNQFLTAIKSGDFQGAGKYLVDGVKMGTDSIDSEMKTKGQTGGQNFADGVKGKEGAAKSAGSAVKNKAKEGATDPNAFKAVGSKDSAGFNNGVMGGKGGAYSAGSSVGNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGRAAASLANKALAAVQKKQDSHSPSKESKKLGGDFGTGYSLGIADKNKAVTKAANNLVASALGTESQIKKLSSTLKDKISSAIDAGLHSKNKSSGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMADLTKQSKEYAASITEKMQSYGSISNVDPENPKSIQAEMQKRLKEIKAFQANVEKLRKKGVSKDIINDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKAMGNTAANAMYSAGINAAKGLINGLNSQKKQLEKAAKSIANTITNSVKKALKIHSPSRVAIELGKFFTGGLGNGVLAGAKGAVQSTNKMVDKVVNAASNMTVPTINLPKISAEKALGLKSVDLNRTITVKTIIDNKTKESSNADLIKAIQQSGDRPIIFNVDGKDIADNTNNHLGSSTSLAFYGKGL |
4IWO Chain:A ((453-652)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKDDYNETVHKKTEVVITLDFCIRNIEKTVKVY-----AAELGEISDIHTKLLRLSSSQG--TIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEKLQVLLNCMTEIYYQFKKDKAERRLAYNE--EQIHKFDKQKLYYHATKAMTHFTDECVKKYEAFLN---------KSEEWIRKMLHLRKQLLSLTNQCFDIEEEVSKYQE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 49191 for 986 contacts (49.9/contact) +
2D Compatibility (PS) -18779 + (NN) -7477 + (LL) 103684
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: 118519.0 ( 120.20 by residue)
QMean score : 0.456
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