Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNNIKQAIIKLETILENGNAIES---GSFVKYSVIKNILSLL-EKDQELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK
1D8B Chain:A ((11-91))
ELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPMNDSAFATL----------GTVE--DKYRRRFKYFKATIADLSKKRSSE-----
General information:
TITO was launched using:
RESULT:
Template:
1D8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38279 for 486 contacts (-78.8/contact) +
2D Compatibility (PS) -7542 + (NN) 2317 + (LL) 1584
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -45920.0 ( -94.49 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_1D8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D8B-query.scw
PDB file :
Tito_Scwrl_1D8B.pdb
: