Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRITDLLSKDVMIMSLQATTKEAAIDEMIASLKSNGKINDEVLFKKAIMNREAQSSTGVGEGIAMPHAKTKAVNEPTVVFAKSEKGLDYDALDGQPAHLFFMIAAPDGANATHLETLAALSRLLVHPAFVQSLRDAKTPEEVINLFNNEQEDSEETVVAPTSTNDTGKSVVAVTACPTGIAHTYMAAEKLQETANKLGVRIKVETNGSRGVENRLTDKEIAEADGVIIAADVQVDMPRFDGKHLIAKPVAAGIHKPEELIKEAISGNAPIYKAEEGSQATESADGLSIGQQIYKHLMSGVSHMLPFVIGGGIAIAIAFMLDQMLGVPQDQLAKLGSYNEIPALLKQIGDVAFGFMLPVFAGYIAYSISDRPGLVAGFVAGGVASVGGAGFLGALVGGFLAGYAVELIKLALKKLPKTLDGIKVVLFYPVLSVLIVGLLMLLLNVPMSALNTWLNDFLNSLSGTNAVILGLLLGAMMAADLGGPINKAAYIFATGTLAASVATGGSAIMAATMAAGMVPPLATFVATLIFRNKFTAQERDAGLTNSILGASFITEGAIPFAAADPLRMIPSFIAGSAITGAIVMFLNIKVLAPHGGVFVIFLVSQPWFYIIAIIIGTLISAGLIGVLRKKPTV |
| 2A0J Chain:A ((4-147)) | --IGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADVFE-CLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96736 for 1110 contacts (-87.1/contact) +
2D Compatibility (PS) -15646 + (NN) -5485 + (LL) 35252
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -94115.0 ( -84.79 by residue)
QMean score : 0.624
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