Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVVWSKEGCHYCKDVKDFLIEQKIVFQDIDVTDHDYLREVLQAKYGICHVPVVEIGNIENGTYQAVTEIGLEHLEKALFEKGEVK
3ZIT Chain:A ((3-76))
--KIEVYAQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEV------VAGFQIEKLQQLLN------
General information:
TITO was launched using:
RESULT:
Template:
3ZIT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63460 for 529 contacts (-120.0/contact) +
2D Compatibility (PS) -8146 + (NN) -2500 + (LL) 864
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -78192.0 ( -147.81 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIT-query.scw
PDB file :
Tito_Scwrl_3ZIT.pdb
: