Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIV-FGLEINANHLASKQAGLVTATAEAIHIGKSTQVWEIKITDETEKLLCISRCTIAVKKKRK
4M20 Chain:D ((7-124))
--LLETFEMSIDHQEDGLVVISMPVTDKVKQPFGYLHGGASIALGETACSLGSANLIDTTKFIPLGLEMNANHIHSAKDGRVTATAEIIHRGKSTHVWDIKIKNDKEQLITVMRGTVAIK----
General information:
TITO was launched using:
RESULT:
Template:
4M20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76825 for 890 contacts (-86.3/contact) +
2D Compatibility (PS) -11924 + (NN) 3152 + (LL) 328
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -98269.0 ( -110.41 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4M20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M20-query.scw
PDB file :
Tito_Scwrl_4M20.pdb
: