Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAV-TRYTSNGRMGMRIFDRWWMDFGGG
2KKE Chain:A ((1-53))
MVGRRPGGGLKDTKPVVVRLYPDEIEALKSRVPANTSMSAYIRRIILNHLEDE
General information:
TITO was launched using:
RESULT:
Template:
2KKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13637 for 208 contacts (-65.6/contact) +
2D Compatibility (PS) -5613 + (NN) -1740 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -22740.0 ( -109.33 by residue)
QMean score : -0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2KKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKE-query.scw
PDB file :
Tito_Scwrl_2KKE.pdb
: