Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LMKHLTLWHTNDVHSHLEH--------------WPRIFNFLKEKRTAADKENQSALFFDIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEGTTLAHEDLDKLYEHAVFPVVCCNFYTNKECTEQPDWVKSIVYKEIEQVKIAIIGATAPFRDYYEE--MGWGIEEPISSIKKQVAGLD-EDTDVVILLSHLGLPSDERIALEIPEVDVILGGHTHHLLETG-----------------KIEGNALLAAAGRWGEYIGKVDIELDENNQILTKTAMTFKTE--DLPAAPNEANEIQGFFDKGRAELSEKVVAIPGKLAH----NWFDDSEIAHILNEAVCEWT---GAETFVMNAGIFMTDFEAGIVTDFDIHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERAGFDA--------ENQVALFD----NKPIDKTREYRIATHDTFVFA-PFFPIVKQIKRKEVYTPELLRDILKWKLKKMYGQEEDK |
2Z1A Chain:A ((28-522)) | --FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR----AKNPLFLDAGDVFQGT-LYFNQYRGLADRYFMHRLRYRAMALGNHE-FDLGPGPLADFLKGARFKVVSANVDASREP-RLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGEDLKLARRLVGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKVVGLLEVTFDAKGELLAYKGEALLMTPEAAPEDFFAKEALLAYAQPVMALMQQVIAEAKVDLVGERAVVRRRESNLGNLITDGMLWKTRNAGTQIALQNGGGIRASIPKGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGV--SQWEN-----------TAGRFLQVSGLRYAFDLSRPAGSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKELKVVEA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258035 for 3965 contacts (-65.1/contact) +
2D Compatibility (PS) -45892 + (NN) -10360 + (LL) 808
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -339229.0 ( -85.56 by residue)
QMean score : 0.478
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