Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWVKAD-DGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
3A7L Chain:A ((1-126))
SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLE
General information:
TITO was launched using:
RESULT:
Template:
3A7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44133 for 1004 contacts (-44.0/contact) +
2D Compatibility (PS) -13136 + (NN) -2544 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -75413.0 ( -75.11 by residue)
QMean score : 0.724
(partial model without unconserved sides chains):
PDB file :
Tito_3A7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7L-query.scw
PDB file :
Tito_Scwrl_3A7L.pdb
: