Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVILIISLLLLVGIGFGVYYFKNANHIGADVSYIKITTDGEKG------KNVSFNYSYTMPAYDEAGKETEVTFSADKNLRKGAYLKLYIKEDKGVTSYEEVPEKEVPSKAAEKLK
2K5Q Chain:A ((2-95))
-------------------------DLNRMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG
General information:
TITO was launched using:
RESULT:
Template:
2K5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16479 for 508 contacts (-32.4/contact) +
2D Compatibility (PS) -9266 + (NN) -1576 + (LL) 2780
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -32791.0 ( -64.55 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_2K5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5Q-query.scw
PDB file :
Tito_Scwrl_2K5Q.pdb
: