Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIFIEVMKERFGEFE--GETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRP-DAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAV-PKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES |
| 1SO0 Chain:C ((6-343)) | -----VTRAVFGELPSGGGTVEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQ----FSRISPDGEEGYPGELKVWVTYTLDG-GELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGK--HLQDFHLN----GFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96966 for 2949 contacts (-32.9/contact) +
2D Compatibility (PS) -35663 + (NN) -7837 + (LL) 2152
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -168564.0 ( -57.16 by residue)
QMean score : 0.458
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