Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKV-EVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN
4HEI Chain:B ((1-91))
-MQINIQGHHIDLTDSMQDYVHSKFDKLERFFDHIN----HVQVILRVEKLRQIAEATLHVNQAEIHAHADDENMYAAIDSLVDKLVRQLNKHKEK--------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41747 for 627 contacts (-66.6/contact) +
2D Compatibility (PS) -9789 + (NN) -1165 + (LL) 4868
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -57983.0 ( -92.48 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_4HEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HEI-query.scw
PDB file :
Tito_Scwrl_4HEI.pdb
: