Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------LLIW-------------------------SILISFAVGI----IMVPIIRKFAFRINAVDT-PRERHKHTKTTATLGGLAIFISFSVGMI--LAPIDKSG--FLPIYF-GALIIIATGFIDDIFDLSPKWKMLGQILAALCVTV-WGDITINFINV------PFYGQV-DFGYFAIPLS-I-IWIVAIVNALNLIDGL--DGLAGGISIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASI-------FMGD-TGALFLGYMIAVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERMPISSADRSHI--HHRLMALGFTEKQTVLL---IYC-MALLFSMTGFVFSFSTT--WGAMLLLLLLIFSIEI-IVEF-IGLIGEDY---RPILNLLQKIHRKRK |
| 4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANG----NDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLR--YQGTEAGPLFWAQYSFL--GLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGF-------GPDCWGLTASYS----VDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382385 for 2630 contacts (-145.4/contact) +
2D Compatibility (PS) -32869 + (NN) 4519 + (LL) 2364
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -422121.0 ( -160.50 by residue)
QMean score : 0.195
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