Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEE-GKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEAN--KGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK
1U1Z Chain:A ((21-165))
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKP--TLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICAERK---
General information:
TITO was launched using:
RESULT:
Template:
1U1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105910 for 1047 contacts (-101.2/contact) +
2D Compatibility (PS) -14766 + (NN) -2275 + (LL) -8
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -143309.0 ( -136.88 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1U1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U1Z-query.scw
PDB file :
Tito_Scwrl_1U1Z.pdb
: