Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTIHWNINKQQSNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFVASYPAKAIQLMEKFWPGPLTVILPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIILRPGGVTKEQIEQIIGP-VDISTNNTKETEKPKAPGMKYTHYAPKAPVYLIEGSTQFWQSEINKAEAANKKLGILATKELINQLNTSGTIETTGSIKALDEIATSLYKGLRAFDHADVDIIFAEVYPETELGAAIMNRLEKAAGNRRITE |
2EQA Chain:A ((2-340)) | --TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTE-RVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEP-VLLRPGPFTIEELKKLFGEIVI------------------YKHYAPNTRLLLVENRNIFKDV-VS-LLSKKYKVALLIPKELSKEF-EGLQQIILGSDENLYEVARNLFDSFRELDKLNVDLGIMIGFPERGIGFAIMNRARKASGFSII-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -191304 for 2820 contacts (-67.8/contact) +
2D Compatibility (PS) -35675 + (NN) -22814 + (LL) 892
1D Compatibility (HY) -29200 + (ID) 6650
Total energy: -284751.0 ( -100.98 by residue)
QMean score : 0.566
|
|
|