Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKA-----STDFVDIEIDKPVPENHDLLVKIKAISINPVDTKQR--EAAKLSGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDVTRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITEN---DKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHRENIPEQLEELGFKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPVEMTLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 3FBG Chain:B ((3-335)) | LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVS--P----RVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIEL-VDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESN-MIGKLVI---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -176412 for 2820 contacts (-62.6/contact) +
2D Compatibility (PS) -34399 + (NN) -4759 + (LL) 488
1D Compatibility (HY) -29200 + (ID) 7300
Total energy: -251582.0 ( -89.21 by residue)
QMean score : 0.572
|
|
|