Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDNGDGLAFNKLPSNTPQLDYFIDKKTKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFLEKSSPEKKEIKLISK |
| 3DS8 Chain:A ((2-251)) | --------------------------------------DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPNSTPQMDYFIKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPKSIEKTYWFLEKFKTDETVIQL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66295 for 2220 contacts (-29.9/contact) +
2D Compatibility (PS) -26604 + (NN) -15550 + (LL) 3044
1D Compatibility (HY) -28400 + (ID) 9450
Total energy: -143255.0 ( -64.53 by residue)
QMean score : 0.501
|
|
|