Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKHTKPSNVNPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVIDK
2D3O Chain:S ((14-113))
LHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVALVDPETGKATRVRKQIVDGKKVRVAVASGKT---
General information:
TITO was launched using:
RESULT:
Template:
2D3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4136 for 563 contacts (7.3/contact) +
2D Compatibility (PS) -10744 + (NN) -4 + (LL) 192
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -14520.0 ( -25.79 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2D3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D3O-query.scw
PDB file :
Tito_Scwrl_2D3O.pdb
: