Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVESYHENGAYFVIAPQIAIPHARPT--DGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
1A3A Chain:A ((5-146))
-FKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYL--GESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNN-EHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAG
General information:
TITO was launched using:
RESULT:
Template:
1A3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106322 for 1116 contacts (-95.3/contact) +
2D Compatibility (PS) -15236 + (NN) -6745 + (LL) 708
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -141145.0 ( -126.47 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_1A3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A3A-query.scw
PDB file :
Tito_Scwrl_1A3A.pdb
: