Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
2FD5 Chain:A ((49-100))
--------------------QSKDALMLEAFE---QLLGKRRELLG---ELDPGLSGKERRALAAAFYLSRKHRDAQV---
General information:
TITO was launched using:
RESULT:
Template:
2FD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1704 for 231 contacts (7.4/contact) +
2D Compatibility (PS) -5729 + (NN) -5301 + (LL) 1472
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -11604.0 ( -50.23 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2FD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FD5-query.scw
PDB file :
Tito_Scwrl_2FD5.pdb
: