Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTNLIQLPGIGKKMVLMLNEIGIEEVADLRGRNPLELYEDTCDKRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHTNERNLKNE
3MAB Chain:A ((3-80))
-LANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWEN-DSSVCMSELYALEGAVQGIRWHG-LDEAKKIELKK---------------
General information:
TITO was launched using:
RESULT:
Template:
3MAB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41758 for 569 contacts (-73.4/contact) +
2D Compatibility (PS) -8028 + (NN) -3951 + (LL) 1184
1D Compatibility (HY) 400 + (ID) 800
Total energy: -52953.0 ( -93.06 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3MAB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MAB-query.scw
PDB file :
Tito_Scwrl_3MAB.pdb
: