Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIVAMNEVVKSFTGDIILEKVSLQLEEGERVGLIGRNGEGKSTILKILKGTEGVDSGIVTSKKGARIGLLEQLSSVDPNIIVEHYLRTSFGELEDMEKELRSLEAEMATNASE--KLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGKLLSQSWGDLSGGEKTKTALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHYSGTVLVVSHDRYFLDEVVEKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLRQWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQ--MQLQFDEAGRSGQEVVVMENLSKSFSEKTIVQEVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDDGVIKVGASVKIASLSQQMEELNEEMTVLDAFRD-----KVAVTEGEARQMLAGFMFYGEMVFRKVRNISGGERMRLRLAQFINMPVNTLILDEPTNHLDIASREVLEEAIRAFSGTIITVSHDRYFIDQLCSKVI-WLENKQLTVYEGNYS-YATSKRR
3J5S Chain:D ((27-542))-----------------ILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI-ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKEL-------EWVRQG-----TKGRQSKGKAR-LARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKR


General information:
TITO was launched using:
RESULT:

Template: 3J5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154319 for 3919 contacts (-39.4/contact) +
2D Compatibility (PS) -54682 + (NN) -25030 + (LL) 2284
1D Compatibility (HY) -32400 + (ID) 8750
Total energy: -272897.0 ( -69.63 by residue)
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3J5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J5S-query.scw
PDB file : Tito_Scwrl_3J5S.pdb: